Hi Nick,
We replaced the T98 in Wild Thyme about 5 years ago, but I prefer to forget the cost and enjoy the benefits - I'm away from home at present, so don't have access to the records but will be home on 10 May. We have been very pleased with the engine.
Whatever engine you buy, you will find you need more stuff. All modern marine engines rotate the opposite way from the Ford based Thornycroft, so a new prop is required. I believe that when you access the more difficult parts of a boat, it's worth addressing all the gear you have access to, so we stripped the engine room and replaced the bilge pump, the sound insulation, the raw water strainer and the exhaust waterlock. We cleaned out and repainted the engine bilge. Since we had access to the aft most keel nut (half inside a frame under the engine sump) and we were getting recurring rust along the hull/keel joint, we dropped the keel and remade the joint. Now no rust there when we haul out.
The other thing that can make a big difference is the amount of work you do yourself. If you get the old engine out and strip the engine room yourself, labour is much reduced and, in the UK at least, labour makes up a large part of the cost. We also found a second hand Brunton prop on the Internet, which Brunton refurbished at a very reasonable price, at least compared with the cost of a new one.
If you want me to dig out the cost of the engine + installation when I get home, let me know.
Peter.